Optimized distributed systems achieve significant performance improvement on sorted merging of massive VCF files

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  1. 1 Emory University
    info

    Emory University

    Atlanta, Estados Unidos

    GRID grid.189967.8

  2. 2 Emory University School of Medicine
    info

    Emory University School of Medicine

    Atlanta, Estados Unidos

    GRID grid.471395.d

  3. 3 University of California, San Francisco
    info

    University of California, San Francisco

    San Francisco, Estados Unidos

    GRID grid.266102.1

  4. 4 Department of Epidemiology, Bloomberg School of Public Health, JHU
  5. 5 Department of Biostatistics, Bloomberg School of Public Health, JHU
  6. 6 Johns Hopkins University
    info

    Johns Hopkins University

    Baltimore, Estados Unidos

    GRID grid.21107.35

  7. 7 Department of Medicine, University of Colorado
  8. 8 Stony Brook University
    info

    Stony Brook University

    Stony Brook, Estados Unidos

    GRID grid.36425.36

  9. 9 Department of Medicine, The Brooklyn Hospital Center
  10. 10 Data and Statistical Sciences, AbbVie
  11. 11 Department of Public Health Sciences, Henry Ford Health System
  12. 12 Center for Health Policy and Health Services Research, Henry Ford Health System
  13. 13 Department of Internal Medicine, Henry Ford Health System
  14. 14 Department of Microbiology, Howard University College of Medicine
  15. 15 National Human Genome Center, Howard University College of Medicine
  16. 16 Stanford University School of Medicine
    info

    Stanford University School of Medicine

    Stanford, Estados Unidos

    GRID grid.471392.a

  17. 17 Icahn School of Medicine at Mount Sinai
    info

    Icahn School of Medicine at Mount Sinai

    Nueva York, Estados Unidos

    GRID grid.59734.3c

  18. 18 Illumina, Inc.
  19. 19 Knome Inc.
  20. 20 Pulmonary and Critical Care Medicine, Morehouse School of Medicine
  21. 21 Northwestern University
    info

    Northwestern University

    Evanston, Estados Unidos

    GRID grid.16753.36

  22. 22 The Ann and Robert H. Lurie Children's Hospital of Chicago
  23. 23 Department of Medicine, Northwestern Feinberg School of Medicine
  24. 24 California Institute for Quantitative Biosciences, University of California, San Francisco
  25. 25 Centro de Investigacion Biomedica en Red de Enfermedades Respiratorias
    info

    Centro de Investigacion Biomedica en Red de Enfermedades Respiratorias

    Madrid, España

  26. 26 University of Chicago
    info

    University of Chicago

    Chicago, Estados Unidos

    GRID grid.170205.1

  27. 27 Department of Chemical Pathology, University of Ibadan
  28. 28 Institute for Genome Sciences, University of Maryland School of Medicine
  29. 29 Program in Personalized and Genomic Medicine, University of Maryland School of Medicine
  30. 30 Department of Medicine, University of Maryland School of Medicine
  31. 31 University of Michigan–Ann Arbor
    info

    University of Michigan–Ann Arbor

    Ann Arbor, Estados Unidos

    GRID grid.214458.e

  32. 32 Department of Medicine, University of Mississippi Medical Center
  33. 33 Department of Physiology and Biophysics, University of Mississippi Medical Center
  34. 34 University of North Carolina at Chapel Hill
    info

    University of North Carolina at Chapel Hill

    Chapel Hill, Estados Unidos

    GRID grid.10698.36

  35. 35 University of Washington
    info

    University of Washington

    Seattle, Estados Unidos

    GRID grid.34477.33

  36. 36 Vanderbilt University
    info

    Vanderbilt University

    Nashville, Estados Unidos

    GRID grid.152326.1

  37. 37 Center for Human Genomics and Personalized Medicine, Wake Forest School of Medicine
  38. 38 Genetics and Epidemiology of Asthma in Barbados, The University of the West Indies
  39. 39 Faculty of Medical Sciences Cave Hill Campus, The University of the West Indies
  40. 40 Queen Elizabeth Hospital, The University of the West Indies
  41. 41 Federal University of Bahia
    info

    Federal University of Bahia

    Salvador, Brasil

    GRID grid.8399.b

  42. 42 Laboratrio de Patologia Experimental, Centro de Pesquisas Gonalo Moniz
  43. 43 University of Cartagena
    info

    University of Cartagena

    Cartagena de Indias, Colombia

    GRID grid.412885.2

  44. 44 National Autonomous University of Honduras
    info

    National Autonomous University of Honduras

    Tegucigalpa, Honduras

    GRID grid.10601.36

  45. 45 Facultad de Medicina, Universidad Catolica de Honduras
  46. 46 Centro de Neumologia y Alergias
  47. 47 Faculty of Medicine, Centro Medico de la Familia
  48. 48 Tropical Medicine Research Institute, The University of the West Indies
  49. 49 Department of Child Health, The University of the West Indies
  50. 50 Centre de Recherches Mdicales de Lambarn
  51. 51 University of Tübingen
    info

    University of Tübingen

    Tubinga, Alemania

    GRID grid.10392.39

  52. 52 Leiden University Medical Center
    info

    Leiden University Medical Center

    Leiden, Holanda

    GRID grid.10419.3d

Journal:
GigaScience

ISSN: 2047-217X

Year of publication: 2018

Volume: 7

Issue: 6

Type: Note

Export: RIS
DOI: 10.1093/gigascience/giy052 PMID: 29762754 SCOPUS: 2-s2.0-85050892395 GOOGLE SCHOLAR lock_openOpen access editor
Data source: Scopus